Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM1 | LSM4 | M5G1X0 | M5FZL2 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.999 |
| LSM1 | M5FPP0_DACPD | M5G1X0 | M5FPP0 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Uncharacterized protein. | 0.802 |
| LSM1 | M5FPS5_DACPD | M5G1X0 | M5FPS5 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | 0.802 |
| LSM1 | M5FSI0_DACPD | M5G1X0 | M5FSI0 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Pyridoxamine 5'-phosphate oxidase. | 0.802 |
| LSM1 | M5FSX9_DACPD | M5G1X0 | M5FSX9 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | TFG domain-containing protein. | 0.650 |
| LSM1 | M5FUR2_DACPD | M5G1X0 | M5FUR2 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Uncharacterized protein. | 0.871 |
| LSM1 | M5G2K3_DACPD | M5G1X0 | M5G2K3 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | DEAD-domain-containing protein; Belongs to the DEAD box helicase family. | 0.996 |
| LSM1 | M5G5R4_DACPD | M5G1X0 | M5G5R4 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Uncharacterized protein. | 0.999 |
| LSM1 | M5G867_DACPD | M5G1X0 | M5G867 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Uncharacterized protein. | 0.976 |
| LSM1 | M5GCW7_DACPD | M5G1X0 | M5GCW7 | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | Nudix hydrolase domain-containing protein. | 0.913 |
| LSM4 | LSM1 | M5FZL2 | M5G1X0 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | U6 snRNA-associated Sm-like protein LSm1; Component of the cytoplasmic LSM1-LSM7 complex which is involved in mRNA degradation. | 0.999 |
| LSM4 | M5FPP0_DACPD | M5FZL2 | M5FPP0 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.772 |
| LSM4 | M5FPS5_DACPD | M5FZL2 | M5FPS5 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | 0.781 |
| LSM4 | M5FSI0_DACPD | M5FZL2 | M5FSI0 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Pyridoxamine 5'-phosphate oxidase. | 0.772 |
| LSM4 | M5FSX9_DACPD | M5FZL2 | M5FSX9 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | TFG domain-containing protein. | 0.494 |
| LSM4 | M5FUR2_DACPD | M5FZL2 | M5FUR2 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.852 |
| LSM4 | M5G2K3_DACPD | M5FZL2 | M5G2K3 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | DEAD-domain-containing protein; Belongs to the DEAD box helicase family. | 0.953 |
| LSM4 | M5G5R4_DACPD | M5FZL2 | M5G5R4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.999 |
| LSM4 | M5G867_DACPD | M5FZL2 | M5G867 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.873 |
| LSM4 | M5GCW7_DACPD | M5FZL2 | M5GCW7 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Nudix hydrolase domain-containing protein. | 0.863 |
page 1 of 6