STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5GDB6_DACPDUncharacterized protein. (633 aa)    
Predicted Functional Partners:
M5G9J9_DACPD
RNA-binding domain-containing protein.
   
 
 0.982
M5G557_DACPD
Ebp2-domain-containing protein.
   
 
 0.978
M5G538_DACPD
Protein MAK16; Belongs to the MAK16 family.
   
 
 0.974
M5G7R7_DACPD
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
 
 0.974
M5G9K7_DACPD
Nop52-domain-containing protein.
   
 
 0.974
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.967
M5FXR9_DACPD
TRASH domain-containing protein.
   
 
 0.966
M5GBB4_DACPD
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.964
M5GBH6_DACPD
Uncharacterized protein.
   
 
 0.963
M5FUV5_DACPD
Ribosome biogenesis protein YTM1.
   
 
 0.961
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.