STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5GFQ7_DACPDG-patch domain-containing protein. (164 aa)    
Predicted Functional Partners:
M5G3B4_DACPD
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.977
M5GB36_DACPD
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.961
M5FXR7_DACPD
RNA helicase.
    
 0.959
M5FTX3_DACPD
G-patch domain-containing protein.
    
 
 0.953
M5FRB7_DACPD
U3 small nucleolar RNA-associated protein 22.
   
 
 0.952
M5FSB5_DACPD
Sas10 domain-containing protein.
    
   0.950
M5FWA6_DACPD
Uncharacterized protein.
    
 
 0.950
M5G5K7_DACPD
U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.
    
   0.950
M5GBZ9_DACPD
Nop14-like protein.
    
   0.950
M5GCW6_DACPD
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
   0.950
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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