STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5GGT5_DACPDUncharacterized protein. (135 aa)    
Predicted Functional Partners:
M5GF37_DACPD
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
 0.787
M5FTX8_DACPD
Chromatin remodeling complex subunit; Belongs to the actin family.
    
 0.771
M5FZC5_DACPD
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.770
M5GDC8_DACPD
Serine/threonine-protein kinase.
    
 0.761
M5GBS1_DACPD
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.745
M5FY89_DACPD
YL1_C domain-containing protein.
    
 0.719
M5G2K3_DACPD
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
   
 0.719
M5G0E6_DACPD
RNA polymerase II.
    
 0.709
M5G100_DACPD
RBP11-like subunit of RNA polymerase.
    
  0.706
M5G1G7_DACPD
Uncharacterized protein.
    
  0.706
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.