STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M5GH17_DACPDARM repeat-containing protein. (793 aa)    
Predicted Functional Partners:
M5FSB5_DACPD
Sas10 domain-containing protein.
   
   0.972
M5GH16_DACPD
Bystin-domain-containing protein.
   
 
 0.950
M5GBT5_DACPD
Nop domain-containing protein.
   
   0.936
M5G015_DACPD
Uncharacterized protein.
   
 
 0.906
M5GBN3_DACPD
TRAUB-domain-containing protein.
   
 
 0.899
M5FYH3_DACPD
DEAD-domain-containing protein.
   
 
 0.869
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
   0.865
M5FR29_DACPD
CBF-domain-containing protein.
   
 
 0.864
M5FRB7_DACPD
U3 small nucleolar RNA-associated protein 22.
   
   0.861
M5FUK2_DACPD
Utp14-domain-containing protein.
   
 
 0.857
Your Current Organism:
Dacryopinax primogenitus
NCBI taxonomy Id: 1858805
Other names: D. primogenitus, DJM 731, DJM-731 SS1, Dacryopinax primogenitus D. J. McLaughlin & E. G. McLaughlin, 2016, Dacryopinax sp. DJM-731 SS1, Dacryopinax sp. MIN 862738, MIN 929365
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