STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OFI48643.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (665 aa)    
Predicted Functional Partners:
OFI48964.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.960
OFI49600.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.959
OFI49602.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.954
OFI48962.1
RND transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.954
OFI49952.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.947
OFI49955.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.947
OFI48234.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.887
OFI49051.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.
  
 
 0.873
OFI50379.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.860
OFI50583.1
Hemin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.847
Your Current Organism:
Floricoccus tropicus
NCBI taxonomy Id: 1859473
Other names: Anthococcus sp. DF1, F. tropicus, Floricoccus tropicus Chuah et al. 2017, JCM 31733, LMG 29833, LMG:29833, Lactobacillales bacterium DF1, Lactobacillales bacterium HibF2, Lactobacillales bacterium HibF5, Streptococcus sp. DF1, Streptococcus sp. HibF2, Streptococcus sp. HibF5, strain DF1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.