STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIQ18491.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (281 aa)    
Predicted Functional Partners:
OIQ18494.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.969
OIQ18490.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.956
OIQ18493.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.956
OIQ18495.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
    0.845
OIQ18488.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.785
OIQ18489.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the methyltransferase superfamily.
       0.785
OIQ18492.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.785
OIQ18496.1
Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.
       0.785
OIQ18497.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.785
OIQ20539.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.779
Your Current Organism:
Bacteriovorax sp. MedPESWde
NCBI taxonomy Id: 1860085
Other names: B. sp. MedPE-SWde, Bacteriovorax sp. MedPE-SWde
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.