STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BM557_05075TIGR01777 family protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. (274 aa)    
Predicted Functional Partners:
OIQ20091.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.741
OIQ22147.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.739
OIQ21471.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.735
OIQ21773.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
OIQ18639.1
Ribonuclease Z; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.723
OIQ19366.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.722
OIQ21470.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.720
OIQ21834.1
Acid protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.715
OIQ17685.1
Fructose 1,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.692
OIQ16962.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.692
Your Current Organism:
Flavobacterium sp. MedPESWcel
NCBI taxonomy Id: 1860086
Other names: F. sp. MedPE-SWcel, Flavobacterium sp. MedPE-SWcel
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.