STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OIQ28919.1DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (221 aa)    
Predicted Functional Partners:
OIQ33468.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 0.996
OIQ24408.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.993
OIQ32741.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.991
OIQ30553.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
 0.987
OIQ27171.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.987
OIQ31479.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.986
OIQ28918.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.975
OIQ26966.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.967
OIQ28917.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.934
OIQ33334.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.907
Your Current Organism:
Alphaproteobacteria bacterium MedPESWcel
NCBI taxonomy Id: 1860092
Other names: A. bacterium MedPE-SWcel, Alphaproteobacteria bacterium MedPE-SWcel
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.