STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OEC98909.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (705 aa)    
Predicted Functional Partners:
OEC99164.1
DUF932 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.875
OEC98907.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.872
OEC98902.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.789
OEC98903.1
DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.789
OEC98904.1
Methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.783
OEC98894.1
Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.781
OEC98899.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.752
OEC98900.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.750
OEC98890.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.744
guaA
Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.741
Your Current Organism:
Rhizobium sp. YK2
NCBI taxonomy Id: 1860096
Other names: R. sp. YK2
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.