STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
waaGFunction of homologous gene experimentally demonstrated in an other organism; enzyme. (373 aa)    
Predicted Functional Partners:
waaP
Kinase that phosphorylates core heptose of lipopolysaccharide; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.
 
  
  0.980
SBT10123.1
Lipopolysaccharide kinase.
 
    0.946
SBT10122.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
 
  0.925
SBT03224.1
Lipopolysaccharide kinase.
  
  0.834
SBT05995.1
LmbE family protein.
 
 
 0.823
rfaC
Lipopolysaccharide heptosyltransferase 1.
 
 
 0.774
SBT07444.1
Trehalose synthase.
    
 0.762
cpsB
Mannose-1-phosphate guanyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.754
SBT10129.1
Lipid A biosynthesis acyltransferase.
    
  0.744
rfaF
ADP-heptose--LPS heptosyltransferase 2.
 
 
 0.742
Your Current Organism:
Accumulibacter aalborgensis
NCBI taxonomy Id: 1860102
Other names: C. Accumulibacter aalborgensis, Candidatus Accumulibacter aalborgensis, Candidatus Accumulibacter sp. S1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.