STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBX18641.1Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (466 aa)    
Predicted Functional Partners:
OBX19230.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.993
OBX20277.1
Pyruvate dehydrogenase complex E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.988
OBX18640.1
DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.978
OBX19226.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.970
OBX19428.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.947
OBX19057.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.937
OBX20490.1
Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.931
OBX20454.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.908
OBX18045.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.904
OBX19501.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.867
Your Current Organism:
Erythrobacter sp. QSSC122B
NCBI taxonomy Id: 1860125
Other names: E. sp. QSSC1-22B, Erythrobacter sp. QSSC1-22B
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