STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBX17800.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (278 aa)    
Predicted Functional Partners:
OBX18962.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.623
OBX19427.1
Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.574
OBX17941.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
OBX17551.1
Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.558
OBX17760.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.532
OBX19446.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.468
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.448
OBX17956.1
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.442
A9995_15075
Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.421
OBX19626.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.412
Your Current Organism:
Erythrobacter sp. QSSC122B
NCBI taxonomy Id: 1860125
Other names: E. sp. QSSC1-22B, Erythrobacter sp. QSSC1-22B
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.