STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA43612.1Transcriptional regulator, MarR family. (146 aa)    
Predicted Functional Partners:
SFA48367.1
PTS system D-glucose-specific IIA component, Glc family /PTS system D-glucose-specific IIB component, Glc family /PTS system D-glucose-specific IIC component, Glc family.
     
 0.850
SFA43607.1
HlyD membrane-fusion protein of T1SS.
 
  
 0.827
SFA43604.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
     0.826
SFA39029.1
DNA-binding transcriptional regulator, MarR family.
  
     0.644
SFA40943.1
PTS system IIB component, Glc family /PTS system IIC component, Glc family.
     
 0.518
SFA42452.1
PTS system sucrose-specific IIB component, Glc family /PTS system sucrose-specific IIC component, Glc family.
     
 0.518
SFA45865.1
PTS system maltose-specific IIB component, Glc family /PTS system maltose-specific IIC component, Glc family.
     
 0.518
SFA47343.1
PTS system trehalose-specific IIB component, Glc family /PTS system trehalose-specific IIC component, Glc family.
     
 0.518
SFA43600.1
NETI protein.
       0.439
Your Current Organism:
Parageobacillus thermantarcticus
NCBI taxonomy Id: 186116
Other names: BGSC 20A1, Bacillus thermantarcticus, Bacillus thermantarcticus corrig. Nicolaus et al. 2002, Bacillus thermoantarcticus, DSM 9572, Geobacillus sp. R-35644, Geobacillus thermantarcticus, Geobacillus thermantarcticus (Nicolaus et al. 2002) Coorevits et al. 2012, LMG 23032, LMG:23032, P. thermantarcticus, strain M1, strain R-35644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.