Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA45716.1 | SFA45719.1 | SAMN05192569_101018 | SAMN05192569_101019 | Protein of unknown function. | Adenine deaminase. | 0.602 |
SFA45716.1 | SFA45727.1 | SAMN05192569_101018 | SAMN05192569_101020 | Protein of unknown function. | Protein of unknown function. | 0.625 |
SFA45716.1 | SFA45731.1 | SAMN05192569_101018 | SAMN05192569_101021 | Protein of unknown function. | Trp operon repressor family. | 0.524 |
SFA45719.1 | SFA45716.1 | SAMN05192569_101019 | SAMN05192569_101018 | Adenine deaminase. | Protein of unknown function. | 0.602 |
SFA45719.1 | SFA45727.1 | SAMN05192569_101019 | SAMN05192569_101020 | Adenine deaminase. | Protein of unknown function. | 0.713 |
SFA45719.1 | SFA45731.1 | SAMN05192569_101019 | SAMN05192569_101021 | Adenine deaminase. | Trp operon repressor family. | 0.678 |
SFA45719.1 | pcrB | SAMN05192569_101019 | SAMN05192569_101022 | Adenine deaminase. | Putative glycerol-1-phosphate prenyltransferase; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales. | 0.485 |
SFA45727.1 | SFA45716.1 | SAMN05192569_101020 | SAMN05192569_101018 | Protein of unknown function. | Protein of unknown function. | 0.625 |
SFA45727.1 | SFA45719.1 | SAMN05192569_101020 | SAMN05192569_101019 | Protein of unknown function. | Adenine deaminase. | 0.713 |
SFA45727.1 | SFA45731.1 | SAMN05192569_101020 | SAMN05192569_101021 | Protein of unknown function. | Trp operon repressor family. | 0.850 |
SFA45727.1 | SFA45742.1 | SAMN05192569_101020 | SAMN05192569_101023 | Protein of unknown function. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.505 |
SFA45727.1 | SFA45748.1 | SAMN05192569_101020 | SAMN05192569_101025 | Protein of unknown function. | Protein involved in sex pheromone biosynthesis. | 0.412 |
SFA45727.1 | ligA | SAMN05192569_101020 | SAMN05192569_101024 | Protein of unknown function. | DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. | 0.486 |
SFA45727.1 | pcrB | SAMN05192569_101020 | SAMN05192569_101022 | Protein of unknown function. | Putative glycerol-1-phosphate prenyltransferase; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales. | 0.614 |
SFA45731.1 | SFA45716.1 | SAMN05192569_101021 | SAMN05192569_101018 | Trp operon repressor family. | Protein of unknown function. | 0.524 |
SFA45731.1 | SFA45719.1 | SAMN05192569_101021 | SAMN05192569_101019 | Trp operon repressor family. | Adenine deaminase. | 0.678 |
SFA45731.1 | SFA45727.1 | SAMN05192569_101021 | SAMN05192569_101020 | Trp operon repressor family. | Protein of unknown function. | 0.850 |
SFA45731.1 | SFA45742.1 | SAMN05192569_101021 | SAMN05192569_101023 | Trp operon repressor family. | DNA helicase-2 / ATP-dependent DNA helicase PcrA. | 0.485 |
SFA45731.1 | SFA45748.1 | SAMN05192569_101021 | SAMN05192569_101025 | Trp operon repressor family. | Protein involved in sex pheromone biosynthesis. | 0.457 |
SFA45731.1 | fapR | SAMN05192569_101021 | SAMN05192569_1003155 | Trp operon repressor family. | Acyl-coenzyme A thioesterase PaaI, contains HGG motif; Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism. | 0.512 |
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