Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA49215.1 | SFA49226.1 | SAMN05192569_102039 | SAMN05192569_102042 | 40-residue YVTN family beta-propeller repeat-containing protein. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.643 |
SFA49215.1 | SFA49230.1 | SAMN05192569_102039 | SAMN05192569_102043 | 40-residue YVTN family beta-propeller repeat-containing protein. | Hypothetical protein; Belongs to the BI1 family. | 0.446 |
SFA49215.1 | SFA49762.1 | SAMN05192569_102039 | SAMN05192569_102248 | 40-residue YVTN family beta-propeller repeat-containing protein. | 5-bromo-4-chloroindolyl phosphate hydrolysis protein. | 0.649 |
SFA49226.1 | SFA49215.1 | SAMN05192569_102042 | SAMN05192569_102039 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.643 |
SFA49226.1 | SFA49230.1 | SAMN05192569_102042 | SAMN05192569_102043 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Hypothetical protein; Belongs to the BI1 family. | 0.462 |
SFA49226.1 | msrA | SAMN05192569_102042 | SAMN05192569_101432 | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.471 |
SFA49230.1 | SFA49215.1 | SAMN05192569_102043 | SAMN05192569_102039 | Hypothetical protein; Belongs to the BI1 family. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.446 |
SFA49230.1 | SFA49226.1 | SAMN05192569_102043 | SAMN05192569_102042 | Hypothetical protein; Belongs to the BI1 family. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.462 |
SFA49230.1 | SFA49233.1 | SAMN05192569_102043 | SAMN05192569_102044 | Hypothetical protein; Belongs to the BI1 family. | Hydroxypyruvate isomerase; Belongs to the hyi family. | 0.459 |
SFA49230.1 | SFA49762.1 | SAMN05192569_102043 | SAMN05192569_102248 | Hypothetical protein; Belongs to the BI1 family. | 5-bromo-4-chloroindolyl phosphate hydrolysis protein. | 0.424 |
SFA49230.1 | msrA | SAMN05192569_102043 | SAMN05192569_101432 | Hypothetical protein; Belongs to the BI1 family. | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | 0.734 |
SFA49233.1 | SFA49230.1 | SAMN05192569_102044 | SAMN05192569_102043 | Hydroxypyruvate isomerase; Belongs to the hyi family. | Hypothetical protein; Belongs to the BI1 family. | 0.459 |
SFA49762.1 | SFA49215.1 | SAMN05192569_102248 | SAMN05192569_102039 | 5-bromo-4-chloroindolyl phosphate hydrolysis protein. | 40-residue YVTN family beta-propeller repeat-containing protein. | 0.649 |
SFA49762.1 | SFA49230.1 | SAMN05192569_102248 | SAMN05192569_102043 | 5-bromo-4-chloroindolyl phosphate hydrolysis protein. | Hypothetical protein; Belongs to the BI1 family. | 0.424 |
msrA | SFA49226.1 | SAMN05192569_101432 | SAMN05192569_102042 | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.471 |
msrA | SFA49230.1 | SAMN05192569_101432 | SAMN05192569_102043 | Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. | Hypothetical protein; Belongs to the BI1 family. | 0.734 |