Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA44847.1 | SFA49874.1 | SAMN05192569_100839 | SAMN05192569_10236 | YycC-like protein. | Helix-turn-helix, Psq domain. | 0.453 |
SFA45210.1 | SFA49874.1 | SAMN05192569_100925 | SAMN05192569_10236 | YhfH-like protein. | Helix-turn-helix, Psq domain. | 0.501 |
SFA49870.1 | SFA49874.1 | SAMN05192569_10235 | SAMN05192569_10236 | Sporulation-control protein. | Helix-turn-helix, Psq domain. | 0.503 |
SFA49870.1 | SFA49879.1 | SAMN05192569_10235 | SAMN05192569_10237 | Sporulation-control protein. | Hypothetical protein. | 0.419 |
SFA49874.1 | SFA44847.1 | SAMN05192569_10236 | SAMN05192569_100839 | Helix-turn-helix, Psq domain. | YycC-like protein. | 0.453 |
SFA49874.1 | SFA45210.1 | SAMN05192569_10236 | SAMN05192569_100925 | Helix-turn-helix, Psq domain. | YhfH-like protein. | 0.501 |
SFA49874.1 | SFA49870.1 | SAMN05192569_10236 | SAMN05192569_10235 | Helix-turn-helix, Psq domain. | Sporulation-control protein. | 0.503 |
SFA49874.1 | SFA49879.1 | SAMN05192569_10236 | SAMN05192569_10237 | Helix-turn-helix, Psq domain. | Hypothetical protein. | 0.773 |
SFA49874.1 | SFA49886.1 | SAMN05192569_10236 | SAMN05192569_10239 | Helix-turn-helix, Psq domain. | Allantoate deiminase. | 0.479 |
SFA49874.1 | SFA51373.1 | SAMN05192569_10236 | SAMN05192569_10305 | Helix-turn-helix, Psq domain. | SEC-C motif-containing protein. | 0.464 |
SFA49874.1 | SFA51385.1 | SAMN05192569_10236 | SAMN05192569_10308 | Helix-turn-helix, Psq domain. | Hypothetical protein. | 0.542 |
SFA49874.1 | SFA52622.1 | SAMN05192569_10236 | SAMN05192569_103710 | Helix-turn-helix, Psq domain. | Putative peptidoglycan lipid II flippase; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane. | 0.474 |
SFA49874.1 | SFA54382.1 | SAMN05192569_10236 | SAMN05192569_10513 | Helix-turn-helix, Psq domain. | Hypothetical protein. | 0.612 |
SFA49874.1 | secF | SAMN05192569_10236 | SAMN05192569_1001148 | Helix-turn-helix, Psq domain. | Protein translocase subunit secF /protein translocase subunit secD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.832 |
SFA49879.1 | SFA49870.1 | SAMN05192569_10237 | SAMN05192569_10235 | Hypothetical protein. | Sporulation-control protein. | 0.419 |
SFA49879.1 | SFA49874.1 | SAMN05192569_10237 | SAMN05192569_10236 | Hypothetical protein. | Helix-turn-helix, Psq domain. | 0.773 |
SFA49879.1 | SFA49886.1 | SAMN05192569_10237 | SAMN05192569_10239 | Hypothetical protein. | Allantoate deiminase. | 0.570 |
SFA49886.1 | SFA49874.1 | SAMN05192569_10239 | SAMN05192569_10236 | Allantoate deiminase. | Helix-turn-helix, Psq domain. | 0.479 |
SFA49886.1 | SFA49879.1 | SAMN05192569_10239 | SAMN05192569_10237 | Allantoate deiminase. | Hypothetical protein. | 0.570 |
SFA49886.1 | secF | SAMN05192569_10239 | SAMN05192569_1001148 | Allantoate deiminase. | Protein translocase subunit secF /protein translocase subunit secD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.471 |
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