STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA50291.1Uncharacterized membrane protein YgaE, UPF0421/DUF939 family. (353 aa)    
Predicted Functional Partners:
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
 
     0.659
SFA38495.1
Maintenance of morphology protein 1.
  
     0.604
SFA51758.1
Uncharacterized protein YuzB, UPF0349 family; Belongs to the UPF0349 family.
  
     0.558
SFA38794.1
Rod shape-determining protein MreD.
  
     0.552
SFA42577.1
Two-component signal transduction system YycFG, regulatory protein YycI.
  
     0.550
SFA50288.1
Glutamate synthase (NADPH/NADH) large chain.
       0.530
SFA42582.1
Two-component signal transduction system YycFG, regulatory protein YycH.
  
     0.496
SFA48936.1
Conserved hypothetical integral membrane protein.
  
     0.496
SFA50283.1
Glutamate synthase (NADPH/NADH) large chain.
       0.489
SFA45020.1
Competence protein ComGA.
  
     0.488
Your Current Organism:
Parageobacillus thermantarcticus
NCBI taxonomy Id: 186116
Other names: BGSC 20A1, Bacillus thermantarcticus, Bacillus thermantarcticus corrig. Nicolaus et al. 2002, Bacillus thermoantarcticus, DSM 9572, Geobacillus sp. R-35644, Geobacillus thermantarcticus, Geobacillus thermantarcticus (Nicolaus et al. 2002) Coorevits et al. 2012, LMG 23032, LMG:23032, P. thermantarcticus, strain M1, strain R-35644
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