STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA52138.1Hypothetical protein. (66 aa)    
Predicted Functional Partners:
SFA45716.1
Protein of unknown function.
  
     0.749
SFA47667.1
Hypothetical protein.
  
     0.724
SFA47663.1
Coat F domain-containing protein.
  
     0.696
SFA50319.1
Hypothetical protein.
  
     0.670
SFA48767.1
Protein of unknown function.
  
     0.636
SFA38143.1
Hypothetical protein.
  
     0.552
SFA52141.1
Myo-inositol-1(or 4)-monophosphatase.
       0.533
SFA38018.1
Transcriptional regulator.
  
     0.513
SFA46192.1
Sporulation protein YpjB.
  
     0.504
SFA42342.1
XapX domain-containing protein.
  
     0.492
Your Current Organism:
Parageobacillus thermantarcticus
NCBI taxonomy Id: 186116
Other names: BGSC 20A1, Bacillus thermantarcticus, Bacillus thermantarcticus corrig. Nicolaus et al. 2002, Bacillus thermoantarcticus, DSM 9572, Geobacillus sp. R-35644, Geobacillus thermantarcticus, Geobacillus thermantarcticus (Nicolaus et al. 2002) Coorevits et al. 2012, LMG 23032, LMG:23032, P. thermantarcticus, strain M1, strain R-35644
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.