STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA55704.1Phage head-tail adaptor, putative, SPP1 family. (106 aa)    
Predicted Functional Partners:
SFA55689.1
Phage major tail protein, phi13 family.
 
    0.950
SFA55698.1
Phage protein, HK97 gp10 family.
 
    0.949
SFA55718.1
Phage major capsid protein, HK97 family.
 
 
 0.940
SFA55709.1
Uncharacterized phage protein (possible DNA packaging).
  
   0.925
SFA55827.1
Uncharacterized phage protein (possible DNA packaging).
 
   0.923
SFA55676.1
Phage tail tape measure protein, TP901 family, core region.
 
     0.890
SFA54732.1
Phage portal protein, HK97 family.
 
   0.864
SFA55558.1
Phage portal protein, HK97 family.
 
   0.864
SFA57551.1
Phage portal protein, HK97 family.
 
   0.854
SFA57583.1
Phage portal protein, HK97 family.
 
   0.854
Your Current Organism:
Parageobacillus thermantarcticus
NCBI taxonomy Id: 186116
Other names: BGSC 20A1, Bacillus thermantarcticus, Bacillus thermantarcticus corrig. Nicolaus et al. 2002, Bacillus thermoantarcticus, DSM 9572, Geobacillus sp. R-35644, Geobacillus thermantarcticus, Geobacillus thermantarcticus (Nicolaus et al. 2002) Coorevits et al. 2012, LMG 23032, LMG:23032, P. thermantarcticus, strain M1, strain R-35644
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.