STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBX21754.1tRNA lysidine(34) synthetase TilS; Derived by automated computational analysis using gene prediction method: Protein Homology. (440 aa)    
Predicted Functional Partners:
OBX23193.1
Glutamine-hydrolyzing GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.868
OBX21752.1
Adenine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.842
OBX21753.1
Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.828
OBX23658.1
aminoacyl-tRNA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.738
OBX24437.1
Transcription-repair coupling factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.691
OBX22723.1
Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.650
OBX23819.1
Protoheme IX farnesyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.649
OBX21653.1
UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.647
OBX21755.1
Aminobenzoate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.622
OBX23809.1
Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.582
Your Current Organism:
Bizionia sp. APA3
NCBI taxonomy Id: 1861784
Other names: B. sp. APA-3, Bizionia sp. APA-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.