STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PF0140Putative sugar transporter protein; Function Code: 14.4 Transport and Binding proteins: Carbohyrates, Organic alcohols, and acids. (387 aa)    
Predicted Functional Partners:
PF0141
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
 
  
 0.682
PF0144
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
 
     0.562
PF0142
Asparaginase; Function Code: 5.6 Central Intermediary Metabolism: Other.
  
    0.475
PF0669
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
 
   0.463
PF0143
Quinolone resistance protein norA homolog; Function Code: 14.6 Transport and Binding Proteins: Other.
       0.458
PF0145
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
  
    0.458
PF0044
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
 
   
 0.433
PF0094
Glutaredoxin-like protein; Function Code: 4.3 Cellular Processes: Chaperones.
  
 
 
 0.415
PF0520
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
  
     0.409
Your Current Organism:
Pyrococcus furiosus
NCBI taxonomy Id: 186497
Other names: P. furiosus DSM 3638, Pyrococcus furiosus DSM 3638, Pyrococcus furiosus str. DSM 3638, Pyrococcus furiosus strain DSM 3638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.