STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rps27aeFunction Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps27AE); Belongs to the eukaryotic ribosomal protein eS31 family. (50 aa)    
Predicted Functional Partners:
rps24e
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps24E).
  
 
 0.995
rpl40e
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl40E).
 
   0.961
rpl29
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl29P).
   
 
 0.957
spt4
DNA-directed RNA polymerase, subunit e'; Stimulates transcription elongation. Belongs to the archaeal Spt4 family.
 
    0.956
rps19e
SSU ribosomal protein S19E; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.
  
 
 0.942
rps17e
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rps17E).
  
   0.925
rpl15e
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl15E).
   
   0.922
rpl37e
LSU ribosomal protein L37E; Binds to the 23S rRNA.
   
   0.922
rps3
SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
   
   0.921
rpl39e
Function Code: 13.4 Translation: Ribosomal proteins: synthesis and modification; (rpl39E).
  
 
 0.920
Your Current Organism:
Pyrococcus furiosus
NCBI taxonomy Id: 186497
Other names: P. furiosus DSM 3638, Pyrococcus furiosus DSM 3638, Pyrococcus furiosus str. DSM 3638, Pyrococcus furiosus strain DSM 3638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.