STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PF0288Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. (211 aa)    
Predicted Functional Partners:
PF1287
Putative ABC transporter (ATP-binding protein); Function Code: 14.1 Transport and Binding Proteins: General.
 
  
 0.863
PF1286
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
 
   
 0.761
PF0164
nifS protein; Function Code: 16 Unknown:.
 
  
 0.623
PF1285
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
 
   
 0.608
pckG
Phosphoenolpyruvate carboxykinase (gtp); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.
       0.576
PF1066
Putative aminotransferase; Function Code: 16 Unknown:.
 
  
 0.572
tgtA
Queuine trna-ribosyltransferase; Exchanges the guanine residue with 7-cyano-7-deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D-loop) of archaeal tRNAs.
       0.525
PF1600
Ferripyochelin binding protein; Function Code: 16 Unknown:.
     
 0.469
rnhB
RNaseH II; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
 
     0.434
PF0857
Function Code: 14.5 Transport and Binding Proteins: Cations.
 
   
 0.432
Your Current Organism:
Pyrococcus furiosus
NCBI taxonomy Id: 186497
Other names: P. furiosus DSM 3638, Pyrococcus furiosus DSM 3638, Pyrococcus furiosus str. DSM 3638, Pyrococcus furiosus strain DSM 3638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.