Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PF0688 | PF0689 | PF0688 | PF0689 | Subtilisin-like protease; Function Code: 13.2 Translation: Degradation of proteins, peptides, and glycopeptides. | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | 0.570 |
PF0688 | pfpI | PF0688 | PF1719 | Subtilisin-like protease; Function Code: 13.2 Translation: Degradation of proteins, peptides, and glycopeptides. | Intracellular protease; Deglycase that catalyzes the deglycation of the Maillard adducts formed between amino groups of proteins and reactive carbonyl groups of glyoxals (Probable). Thus, functions as a protein deglycase that repairs methylglyoxal- and glyoxal-glycated proteins, and releases repaired proteins and lactate or glycolate, respectively. Deglycates cysteine, arginine and lysine residues in proteins, and thus reactivates these proteins by reversing glycation by glyoxals (By similarity). Thus, was shown to afford full protection against glycation of thioredoxin by glyoxal. Act [...] | 0.757 |
PF0688 | pls | PF0688 | PF0287 | Subtilisin-like protease; Function Code: 13.2 Translation: Degradation of proteins, peptides, and glycopeptides. | Pyrolysin; Has endopeptidase activity toward caseins, casein fragments including alpha-S1-casein and synthetic peptides. | 0.706 |
PF0689 | PF0688 | PF0689 | PF0688 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | Subtilisin-like protease; Function Code: 13.2 Translation: Degradation of proteins, peptides, and glycopeptides. | 0.570 |
pfpI | PF0688 | PF1719 | PF0688 | Intracellular protease; Deglycase that catalyzes the deglycation of the Maillard adducts formed between amino groups of proteins and reactive carbonyl groups of glyoxals (Probable). Thus, functions as a protein deglycase that repairs methylglyoxal- and glyoxal-glycated proteins, and releases repaired proteins and lactate or glycolate, respectively. Deglycates cysteine, arginine and lysine residues in proteins, and thus reactivates these proteins by reversing glycation by glyoxals (By similarity). Thus, was shown to afford full protection against glycation of thioredoxin by glyoxal. Act [...] | Subtilisin-like protease; Function Code: 13.2 Translation: Degradation of proteins, peptides, and glycopeptides. | 0.757 |
pls | PF0688 | PF0287 | PF0688 | Pyrolysin; Has endopeptidase activity toward caseins, casein fragments including alpha-S1-casein and synthetic peptides. | Subtilisin-like protease; Function Code: 13.2 Translation: Degradation of proteins, peptides, and glycopeptides. | 0.706 |