Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
PF0444 | PF0854 | Hydrolase; Function Code: 16.0 Unknown. | Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides. | 0.751 |
PF0853 | PF0854 | 5'-methylthioadenosine phosphorylase II; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage. Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides. | 0.410 |
PF0853 | PF0855 | 5'-methylthioadenosine phosphorylase II; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage. Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | 0.410 |
PF0854 | PF0444 | Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides. | Hydrolase; Function Code: 16.0 Unknown. | 0.751 |
PF0854 | PF0853 | Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides. | 5'-methylthioadenosine phosphorylase II; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage. Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.410 |
PF0854 | PF0855 | Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides. | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | 0.773 |
PF0855 | PF0853 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | 5'-methylthioadenosine phosphorylase II; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage. Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily. | 0.410 |
PF0855 | PF0854 | Hypothetical protein; Function Code: 16.1 Conserved Hypothetical. | Function Code: 5.1 Central Intermediary Metabolism: Degradation of polysaccharides. | 0.773 |