STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PF1734Transcriptional regulatory protein, asnC family; Function Code: 10 Regulatory Functions: REGULATORY FUNCTIONS. (148 aa)    
Predicted Functional Partners:
PF1732
Transcriptional regulatory protein, asnC family; Function Code: 10 Regulatory Functions: REGULATORY FUNCTIONS.
   
 
 0.838
PF1733
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
       0.780
srp54
Signal recognition particle protein srp54; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.
  
  
 0.778
tmk
Thymidylate kinase (tmk); Function Code: 9.2 Purines, Pyrimidines, Nucleosides and Nucleotides: Nucleotide and nucleoside interconversions.
  
    0.774
PF1729
Phospho-sugar mutase; Function Code: 3.2 Cell Envelope: Surface polysaccharides, lipopolysaccharides and antigens.
       0.728
PF1728
NDP-sugar synthase; Function Code: 3.2 Cell Envelope: Surface polysaccharides, lipopolysaccharides and antigens.
       0.713
PF1726
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
       0.507
PF1727
Hypothetical protein; Function Code: 16.1 Conserved Hypothetical.
       0.507
Your Current Organism:
Pyrococcus furiosus
NCBI taxonomy Id: 186497
Other names: P. furiosus DSM 3638, Pyrococcus furiosus DSM 3638, Pyrococcus furiosus str. DSM 3638, Pyrococcus furiosus strain DSM 3638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.