STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001717035_01086Unannotated protein. (346 aa)    
Predicted Functional Partners:
GCA_001717035_00178
Unannotated protein.
  
  
  0.837
GCA_001717035_01544
Unannotated protein.
 
 
 0.782
GCA_001717035_00437
Unannotated protein.
  
  
  0.780
GCA_001717035_01085
Unannotated protein.
  
 
 0.776
GCA_001717035_00360
Unannotated protein.
  
  
  0.771
GCA_001717035_00175
Unannotated protein.
  
  
  0.759
GCA_001717035_00183
Unannotated protein.
  
  
  0.759
GCA_001717035_01135
Unannotated protein.
  
     0.693
GCA_001717035_01546
Unannotated protein.
  
 0.686
GCA_001717035_00184
Unannotated protein.
  
   
 0.651
Your Current Organism:
Methanomethylicus mesodigestum
NCBI taxonomy Id: 1867258
Other names: C. Methanomethylicus mesodigestum, Candidatus Methanomethylicus mesodigestum, archaeon V1, archaeon V2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.