STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001717035_01308Unannotated protein. (750 aa)    
Predicted Functional Partners:
GCA_001717035_01307
Unannotated protein.
 
 0.997
GCA_001717035_01769
Unannotated protein.
  
 
 0.922
GCA_001717035_00228
Unannotated protein.
  
 
 0.899
GCA_001717035_00064
Unannotated protein.
  
 
 0.883
GCA_001717035_00539
Unannotated protein.
 
 
 0.868
GCA_001717035_01584
Unannotated protein.
  
 
 0.801
GCA_001717035_00109
Unannotated protein.
     
 0.799
GCA_001717035_00161
Unannotated protein.
    
 0.764
GCA_001717035_01004
Unannotated protein.
   
 
 0.750
GCA_001717035_00750
Unannotated protein.
    
 0.740
Your Current Organism:
Methanomethylicus mesodigestum
NCBI taxonomy Id: 1867258
Other names: C. Methanomethylicus mesodigestum, Candidatus Methanomethylicus mesodigestum, archaeon V1, archaeon V2
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.