STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001717035_01777Unannotated protein. (186 aa)    
Predicted Functional Partners:
GCA_001717035_00283
Unannotated protein.
 
 0.992
GCA_001717035_00235
Unannotated protein.
    
 0.892
GCA_001717035_00228
Unannotated protein.
    
 0.723
GCA_001717035_00372
Unannotated protein.
     
 0.646
GCA_001717035_00081
Unannotated protein.
   
 
  0.587
GCA_001717035_00633
Unannotated protein.
   
 
  0.587
GCA_001717035_01778
Unannotated protein.
       0.531
GCA_001717035_01745
Unannotated protein.
    
  0.462
GCA_001717035_01776
Unannotated protein.
 
     0.451
GCA_001717035_00858
Unannotated protein.
   
   0.427
Your Current Organism:
Methanomethylicus mesodigestum
NCBI taxonomy Id: 1867258
Other names: C. Methanomethylicus mesodigestum, Candidatus Methanomethylicus mesodigestum, archaeon V1, archaeon V2
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.