STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001717025_00006Unannotated protein. (206 aa)    
Predicted Functional Partners:
GCA_001717025_00005
Unannotated protein.
 
     0.936
GCA_001717025_00761
Unannotated protein.
 
  
  0.835
GCA_001717025_00871
Unannotated protein.
  
 
 0.783
GCA_001717025_00007
Unannotated protein.
       0.779
GCA_001717025_00008
Unannotated protein.
       0.761
GCA_001717025_00162
Unannotated protein.
    
  0.649
GCA_001717025_00846
Unannotated protein.
    
  0.649
GCA_001717025_01405
Unannotated protein.
    
  0.647
GCA_001717025_00851
Unannotated protein.
  
  
  0.615
GCA_001717025_01394
Unannotated protein.
  
  
  0.568
Your Current Organism:
Methanomethylicus oleusabulum
NCBI taxonomy Id: 1867260
Other names: C. Methanomethylicus oleusabulum, Candidatus Methanomethylicus oleusabulum, archaeon V3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.