STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLP45911.1MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)    
Predicted Functional Partners:
OLP44897.1
N-acetylglucosamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.709
OLP42413.1
Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.685
OLP45777.1
Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.657
OLP47006.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.611
OLP44026.1
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.572
OLP44213.1
Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.572
OLP43546.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.558
OLP46743.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.530
OLP46771.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.514
OLP45708.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.
       0.505
Your Current Organism:
Rhizobium oryziradicis
NCBI taxonomy Id: 1867956
Other names: ACCC 19962, KCTC 52413, R. oryziradicis, Rhizobium oryziradicis Zhao et al. 2017, Rhizobium sp. N11-2, Rhizobium sp. N19, strain N19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.