STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLP46018.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (313 aa)    
Predicted Functional Partners:
OLP45947.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
OLP45948.1
Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.951
OLP45946.1
6-hydroxynicotinate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.938
OLP46017.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.859
OLP45950.1
Methylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.712
OLP45949.1
Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.666
OLP45945.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.627
OLP45944.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.625
OLP45943.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.
 
     0.608
OLP44549.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.479
Your Current Organism:
Rhizobium oryziradicis
NCBI taxonomy Id: 1867956
Other names: ACCC 19962, KCTC 52413, R. oryziradicis, Rhizobium oryziradicis Zhao et al. 2017, Rhizobium sp. N11-2, Rhizobium sp. N19, strain N19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.