STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OED36635.1Sodium-independent anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (472 aa)    
Predicted Functional Partners:
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.970
OED36995.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.954
OED35941.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.954
OED35878.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.954
OED37041.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.950
OED37035.1
Cytochrome B6; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.950
OED36999.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.950
OED35945.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.950
OED35881.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.950
OED35846.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.949
Your Current Organism:
PVC group bacterium
NCBI taxonomy Id: 1868283
Other names: P. group bacterium (ex Bugula neritina AB1), PVC group bacterium (ex Bugula neritina AB1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.