STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OED50011.1Outer membrane lipid asymmetry maintenance protein MlaD; Derived by automated computational analysis using gene prediction method: Protein Homology. (150 aa)    
Predicted Functional Partners:
OED48700.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OED48701.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OED46425.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
OED49235.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.945
OED49236.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.945
OED46007.1
Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anti-sigma-factor antagonist family.
  
  0.945
OED50144.1
Flagellar motor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.902
OED50010.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.861
OED46426.1
VacJ lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.830
OED50012.1
NADH dehydrogenase; Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.815
Your Current Organism:
Rhodobacteraceae bacterium
NCBI taxonomy Id: 1868286
Other names: R. bacterium (ex Bugula neritina AB1), Rhodobacteraceae bacterium (ex Bugula neritina AB1)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.