STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MINDY1Ubiquitin carboxyl-terminal hydrolase MINDY-1. (508 aa)    
Predicted Functional Partners:
UBA52
ubiquitin-60S ribosomal protein L40 isoform X1.
    
   0.928
ENSTSYP00000000705
annotation not available
    
   0.919
ENSTSYP00000014559
annotation not available
    
   0.889
RPS27A
ubiquitin-40S ribosomal protein S27a.
    
   0.860
ENSTSYP00000022222
annotation not available
    
   0.860
LOC110596262
ubiquitin-40S ribosomal protein S27a-like.
    
   0.860
LOC103274018
ubiquitin-60S ribosomal protein L40-like isoform X2.
    
   0.795
SETD4
SET domain-containing protein 4.
    
 0.741
MMUT
methylmalonyl-CoA mutase, mitochondrial.
    
 0.741
SETD3
Protein-histidine N-methyltransferase.
    
 0.741
Your Current Organism:
Carlito syrichta
NCBI taxonomy Id: 1868482
Other names: C. syrichta, Philippine tarsier, Tarsius syrichta
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.