Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHD79156.1Stomatin/prohibitin-family membrane protease subunit YbbK; Derived by automated computational analysis using gene prediction method: Protein Homology. (369 aa)    
Predicted Functional Partners:
KHD79155.1
Activity regulator of membrane protease YbbK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.975
ftsH
Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
   
 0.818
KHD75451.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.633
KHD75452.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.633
KHD73710.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.633
KHD73130.1
Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.
   
 0.633
KHD72770.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.633
KHD77782.1
Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
   0.603
KHD78903.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0301 (AlgH) family.
   
    0.574
KHD79154.1
Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.572
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
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