Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHD78835.1Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 12 (cellulase H) family. (432 aa)    
Predicted Functional Partners:
KHD78309.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.780
KHD75510.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.774
KHD76806.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  
  0.765
KHD75633.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.757
KHD78596.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.755
KHD76695.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.753
KHD73893.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.747
KHD75810.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.744
KHD74315.1
Pectin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.736
KHD76805.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.728
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
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