Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHD79071.1uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (227 aa)    
Predicted Functional Partners:
KHD73108.1
uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.908
KHD78988.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.774
KHD78986.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.754
KHD78985.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.751
KHD79070.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.750
KHD78987.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.685
KHD77919.1
2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.624
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
    
 0.617
KHD73723.1
Peptidase M22; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.589
KHD75188.1
Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.585
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
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