STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHD78800.1N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (250 aa)    
Predicted Functional Partners:
KHD78633.1
Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.908
KHD77641.1
Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.860
KHD78849.1
N-formimino-L-glutamate deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.772
KHD76712.1
1-pyrroline-5-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.
     
 0.748
KHD78566.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.700
KHD78140.1
Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.636
KHD72153.1
Hydroxyglutarate oxidase; Catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.629
KHD73290.1
Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.
    
 0.607
KHD78237.1
Racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.593
KHD76223.1
Vegetative incompatibility protein HET-E-1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.582
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.