STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menCO-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB). (368 aa)    
Predicted Functional Partners:
KHD78039.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.971
KHD78038.1
Peptidase M20; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.926
KHD78040.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.836
KHD73664.1
3,4-dioxygenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.796
KHD72142.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.796
KHD77363.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.755
KHD72350.1
Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.755
KHD76668.1
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.753
KHD73005.1
Protocatechuate 3,4-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.728
KHD76825.1
fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.579
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.