Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHD77655.1Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (431 aa)    
Predicted Functional Partners:
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
   
 0.605
KHD77654.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.583
KHD79300.1
Alpha-1,6-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.
    
  0.488
KHD79234.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.488
KHD78739.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.488
KHD78781.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.488
KHD78330.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.488
KHD78344.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.488
KHD77430.1
Glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.488
KHD77080.1
Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.488
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.