Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHD77703.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)    
Predicted Functional Partners:
KHD77701.1
Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.948
KHD77702.1
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.862
KHD77704.1
Phytoene desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.862
KHD77773.1
prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.805
KHD77772.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
KHD78100.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.686
KHD74119.1
Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.686
KHD74121.1
Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.685
KHD77714.1
CDP-alcohol phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.657
KHD73163.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.654
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
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