Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHD76416.1Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)    
Predicted Functional Partners:
KHD73496.1
Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.666
KHD77723.1
Chitinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.
 
  
 0.617
KHD78820.1
Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 0.552
KHD76417.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.480
KHD75917.1
Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.479
KHD79324.1
Coagulation factor 5/8 type; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.407
KHD73853.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.407
KHD72878.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.407
KHD76219.1
5-hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
  
 
  0.406
KHD78816.1
Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.401
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.