Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHD76474.1Beta-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (454 aa)    
Predicted Functional Partners:
KHD75161.1
Cellulose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.848
KHD75606.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 26 family.
  
  
  0.752
KHD73327.1
Glycosyl hydrolase family 5; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.742
KHD79137.1
Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.740
KHD75678.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.702
KHD74315.1
Pectin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.697
KHD74411.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.695
KHD78190.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.689
KHD79192.1
Pectin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.686
KHD75810.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.686
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
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