Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHD76282.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (257 aa)    
Predicted Functional Partners:
KHD76281.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
metH
B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
 
  
 0.751
KHD76283.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.719
KHD79161.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.705
KHD76988.1
Molybdenum metabolism regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.700
KHD72980.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.669
KHD78960.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.657
KHD74164.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.633
KHD74009.1
Sarcosine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.
     
  0.617
KHD72774.1
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.617
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
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