STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHD76284.1Alkyl hydroperoxide reductase / thiol specific antioxidant / Mal allergen; Derived by automated computational analysis using gene prediction method: Protein Homology. (595 aa)    
Predicted Functional Partners:
msrA
Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.945
KHD78645.1
Flavoprotein oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.871
KHD76599.1
Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.871
KHD74123.1
Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.871
KHD72687.1
Flavoprotein disulfide reductase; Catalyzes the reduction of nonspecific electron acceptors such as 2,6-dimethyl-1,4-benzoquinone and 5-hydroxy-1,4-naphthaquinone; does not have lipoamide dehydrogenase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.871
KHD76686.1
Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.786
KHD77197.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.771
KHD78353.1
Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.765
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.754
KHD75973.1
Methionine sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.744
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
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