Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHD76287.1Hemolysin III; Derived by automated computational analysis using gene prediction method: Protein Homology. (225 aa)    
Predicted Functional Partners:
KHD76285.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.562
pxpA
Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.561
KHD76286.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.552
KHD76202.1
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.511
KHD78579.1
RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.498
KHD72041.1
Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.
 
 
  0.483
KHD74833.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.465
KHD74544.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.465
KHD74277.1
Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.465
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.