Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHD75921.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (344 aa)    
Predicted Functional Partners:
KHD76702.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.665
KHD77946.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.662
KHD78940.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.606
KHD72998.1
Peptidase M6; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.489
KHD77296.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.437
KHD74872.1
Neuroendocrine convertase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.432
KHD75983.1
Glucan endo-1,3-beta-D-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.426
KHD78403.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.421
KHD77600.1
Tripeptidyl aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.416
KHD75922.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.406
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
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