Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHD75876.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (445 aa)    
Predicted Functional Partners:
KHD75866.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.975
KHD75865.1
alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.852
KHD78461.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
  
 0.796
KHD75330.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
  
 0.796
KHD72467.1
Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
  
 0.796
KHD75500.1
Glycoside hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.
 
     0.766
KHD79314.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.755
KHD78114.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.725
KHD74090.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.713
KHD75436.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.710
Your Current Organism:
Actinoplanes utahensis
NCBI taxonomy Id: 1869
Other names: A. utahensis, ATCC 14539, DSM 43147, IFO 13244, IMSNU 20044, JCM 3122, NBRC 13244, NRRL B-16727, VKM Ac-674
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.